This review articulates many of the conceptual issues motivating my work. This essay provides a non-technical introduction to the same questions.

Why are transposable elements so common, and the genomes so large, in some species but not in others? Transposable elements are selfish genetic elements that can self replicate and insert into new locations in the genome.  My work centers on how changes in modes of inheritance, such as the evolution selfing, sex, and increases in ploidy, affect the evolutionary dynamics of transposons. I’m also interested in how transposons contribute to variation in genome size, particularly in plants.

When are nuclear and mitochondrial genes in conflict? And when will they cooperate? Genomic conflicts often arise because not all genes are inherited in the same way. The conflict between maternally inherited mitochondrial and bi-parentally inherited nuclear genes is one of the best described genomic conflicts in biology. I have investigated how such conflicts can be detected in sequence variation, and in the distribution of cytonuclear genes.  Currently, I am using experimental crosses in Drosophila to test the role of sex chromosome in alleviating the Mother’s Curse (the spread of mitochondrial mutations that are beneficial in females but deleterious in males).

The history of evolutionary biology. Evolutionary biology is a young field with a fascinating history. I have written on the relationship between the gene’s-eye view of evolution and the study of selfish genetic elements, as well as commentaries on books on the life of Bill Hamilton and the Swedish botanist and political radical Bengt Lidforss. Finally, I have reviewed several recent books on transposable elements, and genome evolution.